Python实现CART(基尼指数)

Python实现CART(基尼指数)

运行环境

• Pyhton3
• treePlotter模块(画图所需，不画图可不必)
• matplotlib(如果使用上面的模块必须)

计算过程

st=>start: 开始
e=>end
op1=>operation: 读入数据
op2=>operation: 格式化数据
cond=>condition: 是否建树完成
su=>subroutine: 递归建树
op3=>operation: 选择基尼指数最小的为判决点
op4=>operation: 测试判决情况
op5=>operation: 划分为判决节点子树

st->op1->op2->cond
cond(no)->su->op5->op3->su
cond(yes)->op4->e

输入样例

/* Dataset.txt */
训练集:

    outlook    temperature    humidity    windy
    ---------------------------------------------------------
    sunny       hot            high         false         N
    sunny       hot            high         true          N
    overcast    hot            high         false         Y
    rain        mild           high         false         Y
    rain        cool           normal       false         Y
    rain        cool           normal       true          N
    overcast    cool           normal       true          Y

测试集
    outlook    temperature    humidity    windy
    ---------------------------------------------------------
    sunny       mild           high         false
    sunny       cool           normal       false
    rain        mild           normal       false
    sunny       mild           normal       true
    overcast    mild           high         true
    overcast    hot            normal       false
    rain        mild           high         true

代码实现

# -*- coding: utf-8 -*-
__author__ = 'Wsine'

from math import log
import operator
import treePlotter

def calcShannonEnt(dataSet):
	"""
	输入：数据集
	输出：数据集的香农熵
	描述：计算给定数据集的香农熵
	"""
	numEntries = len(dataSet)
	labelCounts = {}
	for featVec in dataSet:
		currentLabel = featVec[-1]
		if currentLabel not in labelCounts.keys():
			labelCounts[currentLabel] = 0
		labelCounts[currentLabel] += 1
	shannonEnt = 0.0
	for key in labelCounts:
		prob = float(labelCounts[key])/numEntries
		shannonEnt -= prob * log(prob, 2)
	return shannonEnt

def splitDataSet(dataSet, axis, value):
	"""
	输入：数据集，选择维度，选择值
	输出：划分数据集
	描述：按照给定特征划分数据集；去除选择维度中等于选择值的项
	"""
	retDataSet = []
	for featVec in dataSet:
		if featVec[axis] == value:
			reduceFeatVec = featVec[:axis]
			reduceFeatVec.extend(featVec[axis+1:])
			retDataSet.append(reduceFeatVec)
	return retDataSet

def chooseBestFeatureToSplit(dataSet):
	"""
	输入：数据集
	输出：最好的划分维度
	描述：选择最好的数据集划分维度
	"""
	numFeatures = len(dataSet[0]) - 1
	bestGini = 999999.0
	bestFeature = -1
	for i in range(numFeatures):
		featList = [example[i] for example in dataSet]
		uniqueVals = set(featList)
		gini = 0.0
		for value in uniqueVals:
			subDataSet = splitDataSet(dataSet, i, value)
			prob = len(subDataSet)/float(len(dataSet))
			subProb = len(splitDataSet(subDataSet, -1, 'N')) / float(len(subDataSet))
			gini += prob * (1.0 - pow(subProb, 2) - pow(1 - subProb, 2))
		if (gini < bestGini):
			bestGini = gini
			bestFeature = i
	return bestFeature

def majorityCnt(classList):
	"""
	输入：分类类别列表
	输出：子节点的分类
	描述：数据集已经处理了所有属性，但是类标签依然不是唯一的，
		  采用多数判决的方法决定该子节点的分类
	"""
	classCount = {}
	for vote in classList:
		if vote not in classCount.keys():
			classCount[vote] = 0
		classCount[vote] += 1
	sortedClassCount = sorted(classCount.iteritems(), key=operator.itemgetter(1), reversed=True)
	return sortedClassCount[0][0]

def createTree(dataSet, labels):
	"""
	输入：数据集，特征标签
	输出：决策树
	描述：递归构建决策树，利用上述的函数
	"""
	classList = [example[-1] for example in dataSet]
	if classList.count(classList[0]) == len(classList):
		# 类别完全相同，停止划分
		return classList[0]
	if len(dataSet[0]) == 1:
		# 遍历完所有特征时返回出现次数最多的
		return majorityCnt(classList)
	bestFeat = chooseBestFeatureToSplit(dataSet)
	bestFeatLabel = labels[bestFeat]
	myTree = {bestFeatLabel:{}}
	del(labels[bestFeat])
	# 得到列表包括节点所有的属性值
	featValues = [example[bestFeat] for example in dataSet]
	uniqueVals = set(featValues)
	for value in uniqueVals:
		subLabels = labels[:]
		myTree[bestFeatLabel][value] = createTree(splitDataSet(dataSet, bestFeat, value), subLabels)
	return myTree

def classify(inputTree, featLabels, testVec):
	"""
	输入：决策树，分类标签，测试数据
	输出：决策结果
	描述：跑决策树
	"""
	firstStr = list(inputTree.keys())[0]
	secondDict = inputTree[firstStr]
	featIndex = featLabels.index(firstStr)
	classLabel = 'N'
	for key in secondDict.keys():
		if testVec[featIndex] == key:
			if type(secondDict[key]).__name__ == 'dict':
				classLabel = classify(secondDict[key], featLabels, testVec)
			else:
				classLabel = secondDict[key]
	return classLabel

def classifyAll(inputTree, featLabels, testDataSet):
	"""
	输入：决策树，分类标签，测试数据集
	输出：决策结果
	描述：跑决策树
	"""
	classLabelAll = []
	for testVec in testDataSet:
		classLabelAll.append(classify(inputTree, featLabels, testVec))
	return classLabelAll

def storeTree(inputTree, filename):
	"""
	输入：决策树，保存文件路径
	输出：
	描述：保存决策树到文件
	"""
	import pickle
	fw = open(filename, 'wb')
	pickle.dump(inputTree, fw)
	fw.close()

def grabTree(filename):
	"""
	输入：文件路径名
	输出：决策树
	描述：从文件读取决策树
	"""
	import pickle
	fr = open(filename, 'rb')
	return pickle.load(fr)

def createDataSet():
	"""
	outlook->  0: sunny | 1: overcast | 2: rain
	temperature-> 0: hot | 1: mild | 2: cool
	humidity-> 0: high | 1: normal
	windy-> 0: false | 1: true
	"""
	dataSet = [[0, 0, 0, 0, 'N'],
			   [0, 0, 0, 1, 'N'],
			   [1, 0, 0, 0, 'Y'],
			   [2, 1, 0, 0, 'Y'],
			   [2, 2, 1, 0, 'Y'],
			   [2, 2, 1, 1, 'N'],
			   [1, 2, 1, 1, 'Y']]
	labels = ['outlook', 'temperature', 'humidity', 'windy']
	return dataSet, labels

def createTestSet():
	"""
	outlook->  0: sunny | 1: overcast | 2: rain
	temperature-> 0: hot | 1: mild | 2: cool
	humidity-> 0: high | 1: normal
	windy-> 0: false | 1: true
	"""
	testSet = [[0, 1, 0, 0],
			   [0, 2, 1, 0],
			   [2, 1, 1, 0],
			   [0, 1, 1, 1],
			   [1, 1, 0, 1],
			   [1, 0, 1, 0],
			   [2, 1, 0, 1]]
	return testSet

def main():
	dataSet, labels = createDataSet()
	labels_tmp = labels[:] # 拷贝，createTree会改变labels
	desicionTree = createTree(dataSet, labels_tmp)
	#storeTree(desicionTree, 'classifierStorage.txt')
	#desicionTree = grabTree('classifierStorage.txt')
	print('desicionTree:\n', desicionTree)
	treePlotter.createPlot(desicionTree)
	testSet = createTestSet()
	print('classifyResult:\n', classifyAll(desicionTree, labels, testSet))

if __name__ == '__main__':
	main()

输出样例

desicionTree:
 {'outlook': {0: 'N', 1: 'Y', 2: {'windy': {0: 'Y', 1: 'N'}}}}
classifyResult:
 ['N', 'N', 'Y', 'N', 'Y', 'Y', 'N']

附加文件

treePlotter.py

需要配置matplotlib才能使用

import matplotlib.pyplot as plt

decisionNode = dict(boxstyle="sawtooth", fc="0.8")
leafNode = dict(boxstyle="round4", fc="0.8")
arrow_args = dict(arrowstyle="<-")

def plotNode(nodeTxt, centerPt, parentPt, nodeType):
	createPlot.ax1.annotate(nodeTxt, xy=parentPt, xycoords='axes fraction', \
							xytext=centerPt, textcoords='axes fraction', \
							va="center", ha="center", bbox=nodeType, arrowprops=arrow_args)

def getNumLeafs(myTree):
	numLeafs = 0
	firstStr = list(myTree.keys())[0]
	secondDict = myTree[firstStr]
	for key in secondDict.keys():
		if type(secondDict[key]).__name__ == 'dict':
			numLeafs += getNumLeafs(secondDict[key])
		else:
			numLeafs += 1
	return numLeafs

def getTreeDepth(myTree):
	maxDepth = 0
	firstStr = list(myTree.keys())[0]
	secondDict = myTree[firstStr]
	for key in secondDict.keys():
		if type(secondDict[key]).__name__ == 'dict':
			thisDepth = getTreeDepth(secondDict[key]) + 1
		else:
			thisDepth = 1
		if thisDepth > maxDepth:
			maxDepth = thisDepth
	return maxDepth

def plotMidText(cntrPt, parentPt, txtString):
	xMid = (parentPt[0] - cntrPt[0]) / 2.0 + cntrPt[0]
	yMid = (parentPt[1] - cntrPt[1]) / 2.0 + cntrPt[1]
	createPlot.ax1.text(xMid, yMid, txtString)

def plotTree(myTree, parentPt, nodeTxt):
	numLeafs = getNumLeafs(myTree)
	depth = getTreeDepth(myTree)
	firstStr = list(myTree.keys())[0]
	cntrPt = (plotTree.xOff + (1.0 + float(numLeafs)) / 2.0 / plotTree.totalw, plotTree.yOff)
	plotMidText(cntrPt, parentPt, nodeTxt)
	plotNode(firstStr, cntrPt, parentPt, decisionNode)
	secondDict = myTree[firstStr]
	plotTree.yOff = plotTree.yOff - 1.0 / plotTree.totalD
	for key in secondDict.keys():
		if type(secondDict[key]).__name__ == 'dict':
			plotTree(secondDict[key], cntrPt, str(key))
		else:
			plotTree.xOff = plotTree.xOff + 1.0 / plotTree.totalw
			plotNode(secondDict[key], (plotTree.xOff, plotTree.yOff), cntrPt, leafNode)
			plotMidText((plotTree.xOff, plotTree.yOff), cntrPt, str(key))
	plotTree.yOff = plotTree.yOff + 1.0 / plotTree.totalD

def createPlot(inTree):
	fig = plt.figure(1, facecolor='white')
	fig.clf()
	axprops = dict(xticks=[], yticks=[])
	createPlot.ax1 = plt.subplot(111, frameon=False, **axprops)
	plotTree.totalw = float(getNumLeafs(inTree))
	plotTree.totalD = float(getTreeDepth(inTree))
	plotTree.xOff = -0.5 / plotTree.totalw
	plotTree.yOff = 1.0
	plotTree(inTree, (0.5, 1.0), '')
	plt.show()