[CentOS Server] Bug when calling matlab in bash
尝试了好几遍,仍然不能用简写命令调用matlab,这里把过程记录如下。
(1). 登录 server
[She@She ~]$ ssh shecl@xx.xx.xx.xx
Last login: Mon Aug :: from xx.xx.xx.xx
-bash: module: command not found
-bash: module: command not found
-bash: setenv: command not found
-bash: setenv: command not found
bash: setenv: command not found...
(2). 有关 server 的 shell,环境变量等简单信息
[shecl@ ~]$ echo $
-bash [shecl@ ~]$ pwd
/home/shecl [shecl@ ~]$ echo $PATH
/opt/pgi/linux86-/10.6/bin:/usr/lib64/qt-3.3/bin:/usr/lib64/openmpi/bin/:/usr/lib64/mpich/bin/:/opt/pgi/linux86-/10.6/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/shecl/.local/bin:/home/shecl/bin:/usr/local/MATLAB/R2015b/bin:/usr/local/MATLAB/R2015b/bin/glnxa64 [shecl@ ~]$ which matlab
alias matlab='/usr/local/MATLAB/R2015b/bin/matlab'
/usr/local/MATLAB/R2015b/bin/matlab [shecl@ ~]$ alias
alias egrep='egrep --color=auto'
alias fgrep='fgrep --color=auto'
alias grep='grep --color=auto'
alias l.='ls -d .* --color=auto'
alias ll='ls -l --color=auto'
alias ls='ls --color=auto'
alias matlab='/usr/local/MATLAB/R2015b/bin/matlab'
alias mpirun='mpirun -x LD_PRELOAD=libmpi.so'
alias ncdump='/opt/netcdf/bin/ncdump'
alias opendir='nautilus'
alias openpdf='xdg-open'
alias vi='vim'
alias which='alias | /usr/bin/which --tty-only --read-alias --show-dot --show-tilde'
(3). 以简写命令的方式前台调用 matlab,成功。结果如下:
[shecl@192 ~]$ matlab
MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) >
Copyright 1984-2015 The MathWorks, Inc.
R2015b (8.6.0.267246) 64-bit (glnxa64)
August 20, 2015 To get started, type one of these: helpwin, helpdesk, or demo.
For product information, visit www.mathworks.com. >> datevec(now) ans = 1.0e+03 * 2.0160 0.0080 0.0150 0.0170 0.0110 0.0030 >> exit
(4). 测试用的 matlab 脚本: script.m
[shecl@ ~]$ cat script.m
disp(['This demo for matlab ',datestr(now,'yyyy-mm-dd HH:MM:SS')]);
disp('Time of 127s pause');
pause();
disp(['Time is out on ',datestr(now,'yyyy-mm-dd HH:MM:SS')]);
(5). 以绝对路径的方式后台调用 matlab,成功。结果如下:
[shecl@ ~]$ nohup /usr/local/MATLAB/R2015b/bin/matlab -nojvm -nodisplay -nosplash -nodesktop < script.m >running.log >running.err &
[] >> [shecl@ ~]$ cat running.log < M A T L A B (R) >
Copyright - The MathWorks, Inc.
R2015b (8.6.0.267246) -bit (glnxa64)
August , For online documentation, see http://www.mathworks.com/support
For product information, visit www.mathworks.com. >> This demo for matlab -- ::
>> Time of 127s pause
>> >> Time is out on -- ::
>> >> []+ Done nohup /usr/local/MATLAB/R2015b/bin/matlab -nojvm -nodisplay -nosplash -nodesktop < script.m > running.log > running.err
(6). 以简写命令的方式后台调用 matlab,失败。结果如下:
[shecl@ ~]$ nohup matlab -nojvm -nodisplay -nosplash -nodesktop < script.m >running.log >running.err &
[]
[shecl@ ~]$ cat running.log matlab: No MATLAB bin directory for this machine architecture. ARCH = glnxa64 []+ Exit nohup matlab -nojvm -nodisplay -nosplash -nodesktop < script.m > running.log > running.err
(7). bug 描述
[shecl@192 ~]$ nohup /usr/local/MATLAB/R2015b/bin/matlab -nojvm -nodisplay -nosplash -nodesktop < script.m 1>running.log 2>running.err & # 调用成功
[shecl@192 ~]$ nohup matlab -nojvm -nodisplay -nosplash -nodesktop < script.m 1>running.log 2>running.err & # 调用失败
(8). 修复建议,因权限问题,未解决
可以用创建软链接 (ln -s) 的方式修复这个 bug,但是,没有权限来执行该操作。其原因可能是远程登录时限制了权限,需要在主机上操作;也可能是该用户名未分配该权限,需要切换到超级管理员。为安全起见,不建议使用超级管理员远程登录服务器。
[shecl@ ~]$ sudo ln -s /usr/local/MATLAB/R2015b/bin/matlab /usr/local/bin/matlab
[sudo] password for shecl:
Sorry, user shecl is not allowed to execute '/bin/ln -s /usr/local/MATLAB/R2015b/bin/matlab /usr/local/bin/matlab' as root on 192.168.0.45.
记录完毕。
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