MSTE: 基于多向语义关系的有效KGE用于多药副作用预测 论文标题: Effective knowledge graph embeddings based on multidirectional semantics relations for polypharmacy side effects prediction 论文期刊: Bioinformatics 2021 MSTE: 基于多向语义关系的有效KGE用于多药副作用预测 摘要 1.引言 2.相关工作 2.1 KGE 2.2.1 基于平移的…

4.(2021.6.24)Briefings-生物信息学中的图表示学习:趋势.方法和应用 论文标题: Graph representation learning in bioinformatics: trends, methods and applications 论文期刊: Briefings in Bioinformatics 2021 论文地址: https://www.researchgate.net/profile/Haicheng-Yi/publication/354327323_G…

5.(2021.7.12)Bioinformatics-KG4SL:用于人类癌症综合致死率预测的知识图神经网络 论文标题:KG4SL: knowledge graph neural network for synthetic lethality prediction in human cancers 论文地址:https://academic.oup.com/bioinformatics/article/37/Supplement_1/i418/6319703 论文期刊:Bioinformati…

14.(2022.5.21)Bioinformatics-SGCL-DTI:用于DTI预测的监督图协同对比学习 论文标题: Supervised graph co-contrastive learning for drug–target interaction prediction 论文地址: https://academic.oup.com/bioinformatics/article-abstract/38/10/2847/6551245 论文期刊: Bioinformatics 2022…

3.(2021.3.26)Bioinformatics-SumGNN:通过有效的KG聚集进行多类型DDI预测 论文标题: SumGNN: multi-typed drug interaction prediction via efficient knowledge graph summarization 论文地址: https://academic.oup.com/bioinformatics/article-pdf/37/18/2988/40471587/btab207.pdf 论文期刊: B…

2.(2021.3.15)Bioinformatics-MUFFIN:用于DDI预测的多尺度特征融合 论文标题: MUFFIN: multi-scale feature fusion for drug–drug interaction prediction 论文地址: https://www.researchgate.net/profile/Jianmin-Wang-3/publication/350100336_MUFFIN_Multi-Scale_Feature_Fusion_for_Dru…

6.(2021.9.14)Briefings-MPG:一种有效的自我监督框架,用于学习药物分子的全局表示以进行药物发现 论文标题:An effective self-supervised framework for learning expressive molecular global representations to drug discovery 论文期刊:Briefings in Bioinformatics 2021 论文地址:https://www.researchgate.net…

16.(2022)Chip-BCKG-基于临床指南的中国乳腺癌知识图谱的构建与应用 论文标题: Construction and Application of Chinese Breast Cancer Knowledge Graph Based on Clinical Guidelines 论文会议: Chip 16.(2022)Chip-BCKG-基于临床指南的中国乳腺癌知识图谱的构建与应用 摘要 1.引言 2.相关工作 2.1 知识提取 2.2 医学KG 3.乳腺癌知识图谱构建 3.1 本…

论文标题: Mining On Alzheimer's Diseases Related Knowledge Graph to Identity Potential AD-related Semantic Triples for Drug Repurposing 论文地址: https://arxiv.org/pdf/2202.08712 论文期刊: BMC Bioinformatics 2022 9.(2022.2.17)BMC Bioinformatics-挖掘阿尔茨海默病相关KG来确定潜在…

12.(2022.5.4)ACL-SimKGC:基于PLM的简单对比KGC 12.(2022.5.4)ACL-SimKGC:基于PLM的简单对比KGC 摘要 1.引言 2.相关工作 2.1 知识图补全(KGC) 2.2 预训练语言模型(PLM) 2.3 对比学习 3.模型方法 3.1 符号 3.2 模型结构 3.3 负采样 3.3.1 批内负采样(IB) 3.3.2 批前负采样(PB) 3.3.3 自我负采样(SN) 3.3.4 负采样处理 3.4 基于图的重排序 3.5 训练和推断 摘要 知识…