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/* * Copyright (C) 2016 Stephen Ostermiller * http://ostermiller.org/contact.pl?regarding=Java+Utilities * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by *…
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What is TopHat? TopHat is a program that aligns RNA-Seq reads to a genome in order to identify exon-exon splice junctions. It is built on the ultrafast short read mapping program Bowtie. TopHat runs on Linux and OS X. How does TopHat find junctions?…
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