SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes 详细的说明请阅读: http://snpeff.sourceforge.net/SnpEff_manual.html 一, 安装: 首先在家目录下, 下载安装包 wget http://sourceforge.net/projects/snpeff/files/s
一个矛盾: GWAS得到的SNP做富集分析的话,通常都会有强的偏向性. co-localization of GWAS signals to gene-dense and high linkage disequilibrium (LD) regions, and correlations of gene size, location and function 数据库使用注意: 一次最多只能输入200-300个SNP SNP必须以rs id格式输入,否则基本不识别 SNPsnap: a Web-b